Coupling of electrodynamic fields to vibrational modes in helical structures
نویسندگان
چکیده
Helical structures like alpha helices, DNA, and microtubules have profound importance in biology. It has been suggested that these periodic arrangements of constituent units could support collective excitations similarly to crystalline solids. Here, we examine the interaction between such constructs oscillating dipoles, evaluate role helicity coupling electrodynamic fields vibrations. Based on vibrational eigenfunction analyses identify a group modes coherent oscillations give rise strong delocalized response, selectivity frequency, typical range. To describe field scattering due structure vibrations consider an anisotropic permittivity with helical periodicity, which applies all vibration types close dipole locations. The type resonances identified here may help explain diverse functionality cytoskeletal cellular environment.
منابع مشابه
A Computational Study to Find the Vibrational Modes Connected with Specific Molecular Structures of Calculated Compound
The purpose of this research is to provide a deeper understanding of the planar high- symmetry configuration instability. In the ideal case, the distortion corresponds to the movements of nuclei along normal modes that belong to non-totally symmetric irreps of the high symmertry (HS) point group of molecule. The analysis of the structural distortion from the HS nuclear arrangements of the JT ac...
متن کاملLocalized vibrational modes in optically bound structures.
We show, through analytical theory and rigorous numerical calculations, that optical binding can organize a collection of particles into extended, periodic one-dimensional lattices. These lattices, as well as other optically bound structures, are shown to exhibit spatially localized vibrational eigenmodes. The origin of localization here is distinct from the usual mechanisms such as disorder, d...
متن کاملSignature of nonadiabatic coupling in excited-state vibrational modes.
Using analytical excited-state gradients, vibrational normal modes have been calculated at the minimum of the electronic excited-state potential energy surfaces for a set of extended conjugated molecules with different coupling between them. Molecular model systems composed of units of polyphenylene ethynylene (PPE), polyphenylenevinylene (PPV), and naphthacene/pentacene (NP) have been consider...
متن کاملRelating normal vibrational modes to local vibrational modes with the help of an adiabatic connection scheme.
Information on the electronic structure of a molecule and its chemical bonds is encoded in the molecular normal vibrational modes. However, normal vibrational modes result from a coupling of local vibrational modes, which means that only the latter can provide detailed insight into bonding and other structural features. In this work, it is proven that the adiabatic internal coordinate vibration...
متن کاملCombined Vibrator-slot Structures in Electrodynamic Volumes
The problem of excitation of electromagnetic fields by a material body of finite dimensions in presence of coupling hole between two arbitrary electrodynamic volumes is formulated. The problem is reduced to two-dimensional integral equations for the surface electric current on a material body and the equivalent magnetic current on a coupling hole. A physically correct transition from the initia...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Physical Review A
سال: 2021
ISSN: ['1538-4446', '1050-2947', '1094-1622']
DOI: https://doi.org/10.1103/physreva.103.023523